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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926371.1_cds_XP_016474416.1_66445
CDS Infomation

[gene=LOC107796186] [db_xref=GeneID:107796186] [protein=branched-chain-amino-acid aminotransferase 3, chloroplastic-like] [protein_id=XP_016474416.1] [location=complement(join(47777..47894,48043..48155,49717..49812,50792..50908,51435..51533,52450..52581,52668..52844,52992..53169,54172..54257,54465..54605))] [gbkey=CDS]
Sequence

ATGGAGAGCGCCGCCGTGTTCGCCGGCCTTCAGCCTAATCCCGGCCGCCATCACCACCTT
CTTGCTCCATCACGAAGTGCTATTAAGCTTCTTCCTCCTCCTTTCACCGATAAACACCAT
TTTTGTCCTCTTCCGCTCAAGCTTCAGAAGCAGTCGCATTATGCTTCTTACATTAATAAT
AACGCCATAAACAATGGAAATACACTTCGTGTGGCTTCTCCGGCAAGCAACATAACATCT
GAATTAGCCGACATTGATTGGGACAACCTTGGGTTTGGCTTTATGCCTACTGATTATATG
TATGTCATGAAATGTTCTCAAGGTGAAAACTTTTCTAAGGGTGAATTACAGCGTTTCGGT
AACATTGAATTGAGCCCATCTGCTGGAATATTAAATTATGGACAGGGATTGTTCGAAGGT
TTAAAAGCATATCGAAAACATGATGGCAATATATTGTTGTTTCGACCTGAGGAAAATGCA
ATGCGCTTGAAGATGGGTGCTGAACGCATGTGTATGCCTTCACCGTCTGTTGAACAGTTT
GTGGAAGCAGTAAAAGCCACTGTTTTAGCAAATGAAAGATGGATTCCTCCTTCAGGAAAA
GGTTCATTGTACATAAGACCTCTGCTTATGGGGAGTGGAGCTGTCCTTGGTCTTGCTCCA
GCTCCTGAGTACACATTTCTGATTTATGTATCTCCTGTTGGAAATTATTTTAAGGAAGGT
TTGGCACCAATAAATTTGGTAGTTGAGACTGAAATGCACCGCGCAACCCCTGGTGGTACC
GGAGGCGTCAAGACTGTTGGAAATTATGCTGCAGTTCTGAAGGCACAGAGTGCTGCTAAA
GCAAAAGGCTATTCCGATGTTTTGTACCTCGATAGTGTTCAGAAAAGATACCTAGAAGAG
GTTTCCTCTTGCAATGTCTTTATTGTGAAGGGTAATCTGATAGTAACTCCTGCAATTAAA
GGGACAATTCTACCTGGTATTACACGAAAGAGCATAATCGATGTAGCTCTTAGTCAAGGA
TTCGAGGTTGAGGAACGACTGGTGTCCGTGGACGAATTGCTTGATGCTGATGAAGTTTTT
TGTACGGGAACAGCAGTGGTTGTATCTCCTGTGGGTAGCATTACTCGTCAAGGGAAAAGG
GTAACATATGGAAATAATGGGGTTGGTCTTGTGTCTCAGCAATTATACTCTGCACTTACT
AGCCTACAAATGGGACTCACGGAGGATAGGATGGGTTGGATTGTCGAGCTTAAGTGA

Peptide Sequence

PEP ID

XP_016474416.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MESAAVFAGLQPNPGRHHHLLAPSRSAIKLLPPPFTDKHHFCPLPLKLQKQSHYASYINN
NAINNGNTLRVASPASNITSELADIDWDNLGFGFMPTDYMYVMKCSQGENFSKGELQRFG
NIELSPSAGILNYGQGLFEGLKAYRKHDGNILLFRPEENAMRLKMGAERMCMPSPSVEQF
VEAVKATVLANERWIPPSGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG
LAPINLVVETEMHRATPGGTGGVKTVGNYAAVLKAQSAAKAKGYSDVLYLDSVQKRYLEE
VSSCNVFIVKGNLIVTPAIKGTILPGITRKSIIDVALSQGFEVEERLVSVDELLDADEVF
CTGTAVVVSPVGSITRQGKRVTYGNNGVGLVSQQLYSALTSLQMGLTEDRMGWIVELK

Transcript Sequence

Gene sequence data has not been registered.